dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004390_11|CGC1
Gene ID: MGYG000004390_00854
Location and strand information: 7498 - 9330 (+)
Family: 2.A.47.4.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004390_11|CGC1
Gene ID: MGYG000004390_00855
Location and strand information: 9362 - 10453 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004390_11|CGC1
Gene ID: MGYG000004390_00856
Location and strand information: 10626 - 13583 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000004390_11|CGC1
Gene ID: MGYG000004390_00857
Location and strand information: 14137 - 17343 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004390_11|CGC1
Gene ID: MGYG000004390_00858
Location and strand information: 17380 - 19134 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004390_11|CGC1
Gene ID: MGYG000004390_00859
Location and strand information: 19168 - 20892 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004390_11|CGC1
Gene ID: MGYG000004390_00860
Location and strand information: 20952 - 23642 (+)
Family: GH43|GH43_4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8266
Protein molecular weight: 99297.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004390_11|CGC1
Gene ID: MGYG000004390_00861
Location and strand information: 23672 - 24697 (+)
Family: GH43_5
Protein type: CAZyme
Protein description: Intracellular endo-alpha-(1->5)-L-arabinanase
Protein isoelectric point: 8.1487
Protein molecular weight: 37964.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004390_11|CGC1
Gene ID: MGYG000004390_00862
Location and strand information: 24739 - 27177 (+)
Family: GH51
Protein type: CAZyme
Protein description: Extracellular exo-alpha-L-arabinofuranosidase
Protein isoelectric point: 5.1515
Protein molecular weight: 89496.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004390_00854	hypothetical protein	TC	7498	9330	+	2.A.47.4.8
MGYG000004390_00855	hypothetical protein	null	9362	10453	-	Cons_hypoth698
MGYG000004390_00856	HTH-type transcriptional activator RhaS	TF	10626	13583	+	HTH_AraC
MGYG000004390_00857	TonB-dependent receptor SusC	TC	14137	17343	+	1.B.14.6.1
MGYG000004390_00858	hypothetical protein	null	17380	19134	+	SusD-like_3\| SusD_RagB
MGYG000004390_00859	hypothetical protein	null	19168	20892	+	Big_3
MGYG000004390_00860	hypothetical protein	CAZyme	20952	23642	+	GH43\| GH43_4
MGYG000004390_00861	Intracellular endo-alpha-(1->5)-L-arabinanase	CAZyme	23672	24697	+	GH43_5
MGYG000004390_00862	Extracellular exo-alpha-L-arabinofuranosidase	CAZyme	24739	27177	+	GH51
Protein ID	Protein Name	Type	Start	End	Strand	Signature